Draft genome sequence data of a clinical Enterococcus faecalis isolate SHH039 from a patient with cholecystitis from a tertiary care hospital in Sabah, Malaysia

Nur Nashyiroh Izayati Mastor and Vijay Kumar Subbiah and Wan Nazirah Wan Abu Bakar and Khurshida Begum and M. Jahangir Alam and Mohammad Zahirul Hoque (2022) Draft genome sequence data of a clinical Enterococcus faecalis isolate SHH039 from a patient with cholecystitis from a tertiary care hospital in Sabah, Malaysia.

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Abstract

An Enterococcus faecalis strain SHH039 was isolated from a 68 year old man who was hospitalised with cholecystitis. The genomic sequence of this isolate which had a size of 2,990,081 bp and 2,663 proteins with functional assignments is presented here. Analysis of the genome revealed Enterococ- cus faecalis with multiple antibiotic resistance genes which may be associated with acute cholecystitis. It may be not clear if the infection symptoms are the consequence of ente- rococci manifestation. However, this opportunistic organism may play a minor role in the disease.

Item Type:	Article
Additional Information:	Enterococcus faecalis strain SHH039 was sequenced with Illumina HiSeq 40 0 0 platform and core-SNP based phylogenetic tree was then constructed with other 20 clinical enterococcal isolates extracted from the GenBank public database.
Keyword:	Enterococcus faecalis , Cholecystitis , Antibiotic sensitivity and resistance , Draft genome sequencing Sabah , Malaysia
Subjects:	Q Science > QR Microbiology > QR1-502 Microbiology R Medicine > RB Pathology > RB1-214 Pathology > RB151-214 Theories of disease. Etiology. Pathogenesis
Department:	FACULTY > Faculty of Medicine and Health Sciences
Depositing User:	DG MASNIAH AHMAD -
Date Deposited:	18 Mar 2022 16:58
Last Modified:	19 May 2023 10:58
URI:	https://eprints.ums.edu.my/id/eprint/31891

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